bioexplorer::metabolism::MetabolismHandler Class Reference

The MetabolismHandler class handles metabolite concentrations. More...

#include <MetabolismHandler.h>

Inheritance diagram for bioexplorer::metabolism::MetabolismHandler:

Collaboration diagram for bioexplorer::metabolism::MetabolismHandler:

Public Member Functions
	MetabolismHandler ()
	Default constructor. More...
	MetabolismHandler (const CommandLineArguments &args)
	MetabolismHandler (const AttachHandlerDetails &payload)
	MetabolismHandler (const MetabolismHandler &rhs)
	~MetabolismHandler ()
void *	getFrameData (const uint32_t) final
	returns a void pointer to the simulation data for the given frame or nullptr if the frame is not loaded yet. More...
bool	isReady () const final
core::AbstractSimulationHandlerPtr	clone () const final
void	setMetaboliteIds (const int32_ts &metaboliteIds)
Public Member Functions inherited from core::AbstractSimulationHandler
virtual	~AbstractSimulationHandler ()
AbstractSimulationHandler &	operator= (const AbstractSimulationHandler &rhs)
virtual PLATFORM_API void	bind (const MaterialPtr &)
virtual PLATFORM_API void	unbind (const MaterialPtr &)
uint32_t	getCurrentFrame () const
uint64_t	getFrameSize () const
	getFrameSize return the size of the current simulation frame More...
void	setFrameSize (const uint64_t frameSize)
	setFrameSize Sets the size of the current simulation frame More...
uint32_t	getNbFrames () const
	getNbFrames returns the number of frame for the current simulation More...
void	setNbFrames (const uint32_t nbFrames)
	setNbFrames sets the number of frame for the current simulation More...
double	getDt () const
const std::string &	getUnit () const
virtual void	waitReady () const

Additional Inherited Members
Protected Member Functions inherited from core::AbstractSimulationHandler
uint32_t	_getBoundedFrame (const uint32_t frame) const
Protected Attributes inherited from core::AbstractSimulationHandler
uint32_t	_currentFrame {std::numeric_limits<uint32_t>::max()}
uint32_t	_nbFrames {0}
uint64_t	_frameSize {0}
double	_dt {0}
std::string	_unit
floats	_frameData

Detailed Description

The MetabolismHandler class handles metabolite concentrations.

Definition at line 39 of file MetabolismHandler.h.

Constructor & Destructor Documentation

MetabolismHandler() [1/4]

bioexplorer::metabolism::MetabolismHandler::MetabolismHandler

(

)

Default constructor.

Definition at line 35 of file MetabolismHandler.cpp.

MetabolismHandler() [2/4]

bioexplorer::metabolism::MetabolismHandler::MetabolismHandler

(

const CommandLineArguments &

args

)

Definition at line 44 of file MetabolismHandler.cpp.

MetabolismHandler() [3/4]

bioexplorer::metabolism::MetabolismHandler::MetabolismHandler

(

const AttachHandlerDetails &

payload

)

Definition at line 53 of file MetabolismHandler.cpp.

MetabolismHandler() [4/4]

bioexplorer::metabolism::MetabolismHandler::MetabolismHandler

(

const MetabolismHandler &

rhs

)

Definition at line 74 of file MetabolismHandler.cpp.

~MetabolismHandler()

bioexplorer::metabolism::MetabolismHandler::~MetabolismHandler

(

)

Definition at line 79 of file MetabolismHandler.cpp.

Member Function Documentation

clone()

AbstractSimulationHandlerPtr bioexplorer::metabolism::MetabolismHandler::clone ( ) const

finalvirtual

Returns

a clone of the concrete simulation handler implementation.

Implements core::AbstractSimulationHandler.

Definition at line 108 of file MetabolismHandler.cpp.

getFrameData()

void * bioexplorer::metabolism::MetabolismHandler::getFrameData ( const uint32_t  frame )

finalvirtual

returns a void pointer to the simulation data for the given frame or nullptr if the frame is not loaded yet.

Reimplemented from core::AbstractSimulationHandler.

Definition at line 81 of file MetabolismHandler.cpp.

isReady()

bool bioexplorer::metabolism::MetabolismHandler::isReady ( ) const

inlinefinalvirtual

Returns

true if the requested frame from getFrameData() is ready to consume and if it is allowed to advance to the next frame.

Reimplemented from core::AbstractSimulationHandler.

Definition at line 54 of file MetabolismHandler.h.

setMetaboliteIds()

void bioexplorer::metabolism::MetabolismHandler::setMetaboliteIds ( const int32_ts &  metaboliteIds )

inline

Definition at line 58 of file MetabolismHandler.h.

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The documentation for this class was generated from the following files:

• bioexplorer/backend/plugins/Metabolism/plugin/io/handlers/MetabolismHandler.h
• bioexplorer/backend/plugins/Metabolism/plugin/io/handlers/MetabolismHandler.cpp