#include <Neurons.h>

Inheritance diagram for bioexplorer::morphology::Neurons:

Collaboration diagram for bioexplorer::morphology::Neurons:

Public Member Functions
	Neurons (core::Scene &scene, const details::NeuronsDetails &details, const core::Vector3d &assemblyPosition, const core::Quaterniond &assemblyRotation, const core::LoaderProgress &callback=core::LoaderProgress())
	Construct a new Neurons object. More...

Vector4ds	getNeuronSectionPoints (const uint64_t neuronId, const uint64_t sectionId)
	Get the neuron section 3D points for a given section Id. More...

Vector3ds	getNeuronVaricosities (const uint64_t neuronId)
	Get the neuron varicosities location in space. More...

Public Member Functions inherited from bioexplorer::morphology::Morphologies
	Morphologies (const double alignToGrid, const core::Vector3d &position, const core::Quaterniond &rotation, const core::Vector3f &scale=core::Vector3d(1.0, 1.0, 1.0))
	Construct a new Morphologies object. More...

Public Member Functions inherited from bioexplorer::common::SDFGeometries
	SDFGeometries (const double alignToGrid, const core::Vector3d &position=core::Vector3d(0.0, 0.0, 0.0), const core::Quaterniond &rotation=core::Quaterniond(0.0, 0.0, 0.0, 1.0), const core::Vector3d &scale=core::Vector3d(1.0, 1.0, 1.0))
	Construct a new SDFGeometries object. More...

void	addSDFDemo (core::Model &model)
	Add a simple demo of SDF geometries, mainly for testing purpose. More...

Public Member Functions inherited from bioexplorer::common::Node
	Node (const core::Vector3d &scale=core::Vector3d(1.0, 1.0, 1.0))
	Construct a new Node object. More...

virtual	~Node ()=default
	Destroy the Node object. More...

const core::ModelDescriptorPtr	getModelDescriptor () const
	Get the Model Descriptor object. More...

const core::Boxd &	getBounds () const
	Get the bounds of the node. More...

Additional Inherited Members
Protected Member Functions inherited from bioexplorer::morphology::Morphologies
size_t	_getNbMitochondrionSegments () const

void	_addSomaInternals (common::ThreadSafeContainer &container, const size_t materialId, const core::Vector3d &somaPosition, const double somaRadius, const double mitochondriaDensity, const bool useSdf, const double radiusMultiplier)

double	_getDistanceToSoma (const SectionMap &sections, const Section &section)

size_t	_getMaterialFromDistanceToSoma (const double maxDistanceToSoma, const double distanceToSoma) const

Protected Member Functions inherited from bioexplorer::common::SDFGeometries
core::Vector4fs	_getProcessedSectionPoints (const morphology::MorphologyRepresentation &representation, const core::Vector4fs &points)

core::Vector3d	_animatedPosition (const core::Vector4d &position, const uint64_t index=0) const

double	_getCorrectedRadius (const double radius, const double radiusMultiplier) const

Protected Member Functions inherited from bioexplorer::common::Node
void	_setMaterialExtraAttributes ()

Protected Attributes inherited from bioexplorer::common::SDFGeometries
details::CellAnimationDetails	_animationDetails

double	_alignToGrid {0.0}

core::Vector3d	_position

core::Quaterniond	_rotation

Protected Attributes inherited from bioexplorer::common::Node
core::ModelDescriptorPtr	_modelDescriptor {nullptr}

core::Boxd	_bounds

uint32_t	_uuid

core::Vector3d	_scale

Detailed Description

Load a population of neurons from the database according to specified parameters

Definition at line 41 of file Neurons.h.

Constructor & Destructor Documentation

◆ Neurons()

bioexplorer::morphology::Neurons::Neurons	(	core::Scene &	scene,
		const details::NeuronsDetails &	details,
		const core::Vector3d &	assemblyPosition,
		const core::Quaterniond &	assemblyRotation,
		const core::LoaderProgress &	callback = `core::LoaderProgress()`
	)

Construct a new Neurons object.

Parameters

scene	3D scene into which neurons should be loaded
details	Set of attributes defining how neurons should be loaded

Definition at line 78 of file Neurons.cpp.

Member Function Documentation

◆ getNeuronSectionPoints()

Vector4ds bioexplorer::morphology::Neurons::getNeuronSectionPoints	(	const uint64_t	neuronId,
		const uint64_t	sectionId
	)

Get the neuron section 3D points for a given section Id.

Parameters

neuronId	Neuron identifier
sectionId	Neuron section identifier

Returns: Vector4ds 3D points, including radius, for the specified section

Definition at line 1213 of file Neurons.cpp.

◆ getNeuronVaricosities()

Vector3ds bioexplorer::morphology::Neurons::getNeuronVaricosities ( const uint64_t neuronId )

Get the neuron varicosities location in space.

Parameters

neuronId Neuron identifier

Returns: Vector3ds Varicosity locations

Definition at line 1236 of file Neurons.cpp.

The documentation for this class was generated from the following files:

bioexplorer/backend/science/morphologies/Neurons.h
bioexplorer/backend/science/morphologies/Neurons.cpp

Public Member Functions

Additional Inherited Members

Detailed Description

Constructor & Destructor Documentation

◆ Neurons()

Member Function Documentation

◆ getNeuronSectionPoints()

◆ getNeuronVaricosities()