Classes
class	Assembly
	The Assembly class is a container for biological entities (proteins, membranes, sugars, etc.) More...

class	GeneralSettings
	GeneralSettings is a singleton class that holds general settings for the plugin. More...

class	Node
	The Node class. More...

class	SDFGeometries
	The SDFGeometries abstract class is used as a parent to any assembly that potentially requires the signed-distance field technique. More...

class	BezierShape

class	CubeShape

class	FanShape

class	HelixShape

class	MeshShape

class	PlaneShape

class	PointShape

class	RNAShape

class	Shape
	The shape class allows the creation of 3D shapes generated by a number of element instances. Shapes can be a sphere, a cube, based on a mesh, etc. Elements are molecules loaded from PDB files. More...

class	SinusoidShape

class	SphereShape

class	SphericalCellDiffusionShape

class	ThreadSafeContainer
	The ThreadSafeContainer class is used to load large datasets in parallel. Every individual element is loaded in a separate thread and eventualy merged into a single Core model. More...

struct	GeometryNode

struct	SDFMorphologyData

struct	SimulationReport

class	UniqueId
	The UniqueID class provides a way to get a unique identifier accross the application. More...

Typedefs
using	NodePtr = std::shared_ptr< Node >

using	NodeMap = std::map< std::string, NodePtr >

typedef std::shared_ptr< RNAShape >	RNAShapePtr

typedef std::shared_ptr< Shape >	ShapePtr

using	MaterialSet = std::set< size_t >

using	Neighbours = std::set< size_t >

using	AssemblyPtr = std::shared_ptr< Assembly >

using	AssemblyMap = std::map< std::string, AssemblyPtr >

using	AssemblyConstraint = std::pair< AssemblyConstraintType, AssemblyPtr >

using	AssemblyConstraints = std::vector< AssemblyConstraint >

using	GeometryNodes = std::map< uint64_t, GeometryNode >

using	GeometryEdges = std::map< uint64_t, uint64_t >

using	Bifurcations = std::map< uint64_t, uint64_ts >

using	ThreadSafeContainers = std::vector< ThreadSafeContainer >

using	SDFGeometriesPtr = std::shared_ptr< SDFGeometries >

Enumerations
enum class	AssemblyConstraintType { inside = 0 , outside = 1 }

enum class	ReportType { undefined = 0 , spike = 1 , soma = 2 , compartment = 3 , synapse_efficacy = 4 }

enum class	XYZFileFormat { unspecified = 0 , xyz_binary = 1 , xyzr_binary = 2 , xyzrv_binary = 3 , xyz_ascii = 4 , xyzr_ascii = 5 , xyzrv_ascii = 6 }
	File format for export of atom coordinates, radius and charge. More...

Functions
std::string &	ltrim (std::string &s)
	Left trim of a string. More...

std::string &	rtrim (std::string &s)
	Right trim of a string. More...

std::string &	trim (std::string &s)
	Left and right trim of a string. More...

bool	isClipped (const core::Vector3d &position, const Vector4ds &clippingPlanes)
	isClipped Determine if a 3d position is inside a volume defined by clipping planes More...

void	setDefaultTransferFunction (core::Model &model, const core::Vector2d range={0.0, 1.0}, const double alpha=1.0)
	Set the default transfer function (Unipolar) to a given model. More...

Vector4ds	getClippingPlanes (const core::Scene &scene)
	Get the Clipping Planes from the scene. More...

Vector2d	doublesToVector2d (const doubles &value)
	Converts a vector of doubles into a 2D vector. More...

Vector3d	doublesToVector3d (const doubles &value)
	Converts a vector of doubles into a 3D vector. More...

doubles	vector3dToDoubles (const core::Vector3d &value)
	Converts a 3D vector to a vector of doubles. More...

Vector4d	doublesToVector4d (const doubles &value)
	Converts a vector of doubles into a 4D vector. More...

Quaterniond	doublesToQuaterniond (const doubles &values)
	Converts a vector of doubles into a Quaternion. More...

Vector4ds	doublesToVector4ds (const doubles &values)
	Converts a vector of doubles into vector of 4D vectors. More...

MolecularSystemAnimationDetails	doublesToMolecularSystemAnimationDetails (const doubles &values)
	Converts a vector of doubles into molecular system animation details. More...

CellAnimationDetails	doublesToCellAnimationDetails (const doubles &values)
	Converts a vector of doubles into cell animation details. More...

NeuronsReportParameters	doublesToNeuronsReportParametersDetails (const doubles &values)
	Converts a vector of doubles into neurons report parameters details. More...

std::vector< std::string >	split (const std::string &s, const std::string &delimiter=CONTENTS_DELIMITER)
	Splits a string according to the delimiter. More...

Transformation	combineTransformations (const core::Transformations &transformations)
	Combine a list of transformations. More...

Vector3d	sphereFilling (const double radius, const uint64_t occurrence, const uint64_t occurrences, const uint64_t rnd, core::Vector3d &position, core::Quaterniond &rotation, const double ratio=1.0)
	Returns a position and a rotation of a instance on a sphere using a sphere-filling algorithm. More...

bool	rayBoxIntersection (const core::Vector3d &origin, const core::Vector3d &direction, const core::Boxd &box, const double t0, const double t1, double &t)
	Intersection between a ray and a box. More...

double	sphereVolume (const double radius)

double	cylinderVolume (const double height, const double radius)

double	coneVolume (const double height, const double r1, const double r2)

double	capsuleVolume (const double height, const double radius)

Vector3f	transformVector3f (const Vector3f &v, const Matrix4f &transformation)

Vector3ds	getPointsInSphere (const size_t nbPoints, const double innerRadius)

double	mix (const double x, const double y, const double a)

double	frac (const double x)

Vector3d	frac (const Vector3d v)

double	hash (double n)

double	noise (const Vector3d &x)

Vector3d	mod (const Vector3d &v, const int m)

double	cells (const Vector3d &p, const double cellCount)

double	worleyNoise (const Vector3d &p, double cellCount)

size_t	getMaterialIdFromOrientation (const Vector3d &orientation)

double	rnd0 ()
	Return a random double between 0 and 1. More...

double	rnd1 ()
	Return a random double between -0.5 and 0.5. More...

double	rnd2 (const uint64_t index)
	Return a predefined random double between -0.5 and 0.5. More...

double	rnd3 (const uint64_t index)
	Return a controlled random double between -0.5 and 0.5, currently a sinusoidal function. More...

Quaterniond	weightedRandomRotation (const core::Quaterniond &q, const uint64_t seed, const uint64_t index, const double weight)
	Randomly alters a quaternion according to the specified parameters. More...

Quaterniond	randomQuaternion (const uint64_t seed)
	Generate a random quaternion. More...

bool	andCheck (const uint32_t value, const uint32_t test)
	Check is test is part of value using the AND operator. More...

std::string	boolAsString (const bool value)
	Return a Yes/No string representation of a boolean. More...

double	valueFromDoubles (const doubles &array, const size_t index, const double defaultValue)
	Returns the value of an array of double at a given index. Default value if index is out of bounds. More...

Vector3d	getAlignmentToGrid (const double gridSize, const core::Vector3d &position)
	Align a 3D position to a given grid. More...

Variables
uint64_t	_faceIndex = 0

double	_surfaceCoveringProcess = 0.0

double	_instanceCoveringProcess = 0.0

const float	equalityEpsilon = 1e-6f

const std::vector< double >	randoms

Typedef Documentation

◆ AssemblyConstraint

using bioexplorer::common::AssemblyConstraint = typedef std::pair<AssemblyConstraintType, AssemblyPtr>

Definition at line 96 of file Types.h.

◆ AssemblyConstraints

using bioexplorer::common::AssemblyConstraints = typedef std::vector<AssemblyConstraint>

Definition at line 97 of file Types.h.

◆ AssemblyMap

using bioexplorer::common::AssemblyMap = typedef std::map<std::string, AssemblyPtr>

Definition at line 89 of file Types.h.

◆ AssemblyPtr

using bioexplorer::common::AssemblyPtr = typedef std::shared_ptr<Assembly>

Definition at line 88 of file Types.h.

◆ Bifurcations

using bioexplorer::common::Bifurcations = typedef std::map<uint64_t, uint64_ts>

Definition at line 112 of file Types.h.

◆ GeometryEdges

using bioexplorer::common::GeometryEdges = typedef std::map<uint64_t, uint64_t>

Definition at line 111 of file Types.h.

◆ GeometryNodes

using bioexplorer::common::GeometryNodes = typedef std::map<uint64_t, GeometryNode>

Definition at line 110 of file Types.h.

◆ MaterialSet

using bioexplorer::common::MaterialSet = typedef std::set<size_t>

Definition at line 80 of file Types.h.

◆ Neighbours

using bioexplorer::common::Neighbours = typedef std::set<size_t>

Definition at line 81 of file Types.h.

◆ NodeMap

typedef std::map< std::string, NodePtr > bioexplorer::common::NodeMap

Definition at line 74 of file Node.h.

◆ NodePtr

typedef std::shared_ptr< Node > bioexplorer::common::NodePtr

Definition at line 73 of file Node.h.

◆ RNAShapePtr

typedef std::shared_ptr<RNAShape> bioexplorer::common::RNAShapePtr

Definition at line 78 of file RNAShape.h.

◆ SDFGeometriesPtr

using bioexplorer::common::SDFGeometriesPtr = typedef std::shared_ptr<SDFGeometries>

Definition at line 120 of file Types.h.

◆ ShapePtr

typedef std::shared_ptr<Shape> bioexplorer::common::ShapePtr

Definition at line 99 of file Shape.h.

◆ ThreadSafeContainers

using bioexplorer::common::ThreadSafeContainers = typedef std::vector<ThreadSafeContainer>

Definition at line 116 of file Types.h.

Enumeration Type Documentation

◆ AssemblyConstraintType

enum bioexplorer::common::AssemblyConstraintType

strong

Enumerator
inside
outside

Definition at line 91 of file Types.h.

◆ ReportType

enum bioexplorer::common::ReportType

strong

Enumerator
undefined
spike
soma
compartment
synapse_efficacy

Definition at line 133 of file Types.h.

◆ XYZFileFormat

enum bioexplorer::common::XYZFileFormat

strong

File format for export of atom coordinates, radius and charge.

Enumerator
unspecified	Unspecified
xyz_binary	x, y, z coordinates stored in binary representation (4 byte double)
xyzr_binary	x, y, z coordinates and radius stored in binary representation (4 byte double)
xyzrv_binary	x, y, z coordinates, radius, and charge stored in binary representation (4 byte double)
xyz_ascii	x, y, z coordinates stored in space separated ascii representation. One line per atom
xyzr_ascii	x, y, z coordinates and radius stored in space separated ascii representation. One line per atom
xyzrv_ascii	x, y, z coordinates, radius, and charge stored in space separated ascii representation. One line per atom

Definition at line 159 of file Types.h.

Function Documentation

◆ andCheck()

bool bioexplorer::common::andCheck	(	const uint32_t	value,
		const uint32_t	test
	)

Check is test is part of value using the AND operator.

Parameters

value	Value to test
test	Test value

Returns: true is test is part of value using the AND operator, false otherwise

Definition at line 600 of file Utils.cpp.

◆ boolAsString()

std::string bioexplorer::common::boolAsString ( const bool value )

Return a Yes/No string representation of a boolean.

Parameters

value Boolean value

Returns: std::string Yes if true, No otherwise

Definition at line 605 of file Utils.cpp.

◆ capsuleVolume()

double bioexplorer::common::capsuleVolume	(	const double	height,
		const double	radius
	)

Definition at line 451 of file Utils.cpp.

◆ cells()

double bioexplorer::common::cells	(	const Vector3d &	p,
		const double	cellCount
	)

Definition at line 520 of file Utils.cpp.

◆ combineTransformations()

core::Transformation bioexplorer::common::combineTransformations ( const core::Transformations & transformations )

Combine a list of transformations.

Parameters

transformations List of transformations

Returns: Transformation Result of the combination

Definition at line 357 of file Utils.cpp.

◆ coneVolume()

double bioexplorer::common::coneVolume	(	const double	height,
		const double	r1,
		const double	r2
	)

Definition at line 446 of file Utils.cpp.

◆ cylinderVolume()

double bioexplorer::common::cylinderVolume	(	const double	height,
		const double	radius
	)

Definition at line 441 of file Utils.cpp.

◆ doublesToCellAnimationDetails()

details::CellAnimationDetails bioexplorer::common::doublesToCellAnimationDetails ( const doubles & values )

Converts a vector of doubles into cell animation details.

Parameters

value Vector of doubles

Returns: CellAnimationDetails The animation details

Definition at line 315 of file Utils.cpp.

◆ doublesToMolecularSystemAnimationDetails()

details::MolecularSystemAnimationDetails bioexplorer::common::doublesToMolecularSystemAnimationDetails ( const doubles & values )

Converts a vector of doubles into molecular system animation details.

Parameters

value Vector of doubles

Returns: MolecularSystemAnimationDetails The animation details

Definition at line 303 of file Utils.cpp.

◆ doublesToNeuronsReportParametersDetails()

details::NeuronsReportParameters bioexplorer::common::doublesToNeuronsReportParametersDetails ( const doubles & values )

Converts a vector of doubles into neurons report parameters details.

Parameters

value Vector of doubles

Returns: NeuronsReportParameters The neurons report parameters details

Definition at line 325 of file Utils.cpp.

◆ doublesToQuaterniond()

core::Quaterniond bioexplorer::common::doublesToQuaterniond ( const doubles & values )

Converts a vector of doubles into a Quaternion.

Parameters

values Vector of doubles

Returns: Quaternion A quaternion

Definition at line 281 of file Utils.cpp.

◆ doublesToVector2d()

core::Vector2d bioexplorer::common::doublesToVector2d ( const doubles & value )

Converts a vector of doubles into a 2D vector.

Parameters

value Vector of doubles

Returns: Vector2d A 2D vector

Definition at line 249 of file Utils.cpp.

◆ doublesToVector3d()

core::Vector3d bioexplorer::common::doublesToVector3d ( const doubles & value )

Converts a vector of doubles into a 3D vector.

Parameters

value Vector of doubles

Returns: Vector3d A 3D vector

Definition at line 258 of file Utils.cpp.

◆ doublesToVector4d()

core::Vector4d bioexplorer::common::doublesToVector4d ( const doubles & value )

Converts a vector of doubles into a 4D vector.

Parameters

value Vector of doubles

Returns: Vector3d A 4D vector

Definition at line 272 of file Utils.cpp.

◆ doublesToVector4ds()

Vector4ds bioexplorer::common::doublesToVector4ds ( const doubles & values )

Converts a vector of doubles into vector of 4D vectors.

Parameters

values Vector of doubles

Returns: Quaternion A vector of 4D vectors

Definition at line 290 of file Utils.cpp.

◆ frac() [1/2]

double bioexplorer::common::frac ( const double x )

Definition at line 488 of file Utils.cpp.

◆ frac() [2/2]

core::Vector3d bioexplorer::common::frac ( const Vector3d v )

Definition at line 493 of file Utils.cpp.

◆ getAlignmentToGrid()

core::Vector3d bioexplorer::common::getAlignmentToGrid	(	const double	gridSize,
		const core::Vector3d &	position
	)

Align a 3D position to a given grid.

Parameters

gridSize	Grid size
position	3D position

Returns: Vector3d An 3D position aligned to the grid

Definition at line 617 of file Utils.cpp.

◆ getClippingPlanes()

Vector4ds bioexplorer::common::getClippingPlanes ( const core::Scene & scene )

Get the Clipping Planes from the scene.

Parameters

scene 3D scene

Returns: Vector4ds List of clipping planes

Definition at line 236 of file Utils.cpp.

◆ getMaterialIdFromOrientation()

size_t bioexplorer::common::getMaterialIdFromOrientation ( const Vector3d & orientation )

Definition at line 546 of file Utils.cpp.

◆ getPointsInSphere()

Vector3ds bioexplorer::common::getPointsInSphere	(	const size_t	nbPoints,
		const double	innerRadius
	)

Definition at line 467 of file Utils.cpp.

◆ hash()

double bioexplorer::common::hash ( double n )

Definition at line 498 of file Utils.cpp.

◆ isClipped()

bool bioexplorer::common::isClipped	(	const core::Vector3d &	position,
		const Vector4ds &	clippingPlanes
	)

isClipped Determine if a 3d position is inside a volume defined by clipping planes

Parameters

position	Position to check
clippingPlanes	Clipping planes defining the volume

Returns: True if the position does not belong to the volume, false otherwise

Definition at line 83 of file Utils.cpp.

◆ ltrim()

std::string & bioexplorer::common::ltrim ( std::string & s )

Left trim of a string.

Parameters

s	String to trim

Returns: Trimmed string

Definition at line 66 of file Utils.cpp.

◆ mix()

double bioexplorer::common::mix	(	const double	x,
		const double	y,
		const double	a
	)

Definition at line 483 of file Utils.cpp.

◆ mod()

core::Vector3d bioexplorer::common::mod	(	const Vector3d &	v,
		const int	m
	)

Definition at line 515 of file Utils.cpp.

◆ noise()

double bioexplorer::common::noise ( const Vector3d & x )

Definition at line 503 of file Utils.cpp.

◆ randomQuaternion()

core::Quaterniond bioexplorer::common::randomQuaternion ( const uint64_t seed )

Generate a random quaternion.

Parameters

seed	Seed to apply to the randomness

Returns: Quaterniond Random quaternion

Definition at line 581 of file Utils.cpp.

◆ rayBoxIntersection()

bool bioexplorer::common::rayBoxIntersection	(	const core::Vector3d &	origin,
		const core::Vector3d &	direction,
		const core::Boxd &	box,
		const double	t0,
		const double	t1,
		double &	t
	)

Intersection between a ray and a box.

Parameters

origin	Origin of the ray
direction	Direction of the ray
box	Box
t0	Initial t of the ray
t1	Final t of the ray
t	Intersection value of t if an intersection if found

Returns: true The ray intersects with the box; false The ray does not intersect with the box

Definition at line 398 of file Utils.cpp.

◆ rnd0()

double bioexplorer::common::rnd0 ( )

Return a random double between 0 and 1.

Returns: double A random double between 0 and 1

Definition at line 553 of file Utils.cpp.

◆ rnd1()

double bioexplorer::common::rnd1 ( )

Return a random double between -0.5 and 0.5.

Returns: double A random double between -0.5 and 0.5

Definition at line 558 of file Utils.cpp.

◆ rnd2()

double bioexplorer::common::rnd2 ( const uint64_t index )

Return a predefined random double between -0.5 and 0.5.

Parameters

index Index of the random double in a predefined array

Returns: double A random double between -0.5 and 0.5

Definition at line 563 of file Utils.cpp.

◆ rnd3()

double bioexplorer::common::rnd3 ( const uint64_t index )

Return a controlled random double between -0.5 and 0.5, currently a sinusoidal function.

Parameters

index Index of the random double in a sinusoidal function

Returns: double A random double between -0.5 and 0.5

Definition at line 568 of file Utils.cpp.

◆ rtrim()

std::string & bioexplorer::common::rtrim ( std::string & s )

Right trim of a string.

Parameters

s	String to trim

Returns: Trimmed string

Definition at line 72 of file Utils.cpp.

◆ setDefaultTransferFunction()

void bioexplorer::common::setDefaultTransferFunction	(	core::Model &	model,
		const core::Vector2d	range = `{0.0, 1.0}`,
		const double	alpha = `1.0`
	)

Set the default transfer function (Unipolar) to a given model.

Parameters

model Model to which the transfer function should be set

Definition at line 99 of file Utils.cpp.

◆ sphereFilling()

core::Vector3d bioexplorer::common::sphereFilling	(	const double	radius,
		const uint64_t	occurrence,
		const uint64_t	occurrences,
		const uint64_t	rnd,
		core::Vector3d &	position,
		core::Quaterniond &	rotation,
		const double	ratio = `1.0`
	)

Returns a position and a rotation of a instance on a sphere using a sphere-filling algorithm.

Parameters

radius	Radius of the sphere
occurrences	Total number of instances
rnd	Randomized occurrence of the instance (optional)
position	Resulting position of the instance on the sphere
rotation	Resulting orientation of the instance on the sphere
ratio	Ratio of coverage of the sphere

Returns: Vector3d

Definition at line 380 of file Utils.cpp.

◆ sphereVolume()

double bioexplorer::common::sphereVolume ( const double radius )

Definition at line 436 of file Utils.cpp.

◆ split()

std::vector< std::string > bioexplorer::common::split	(	const std::string &	s,
		const std::string &	delimiter = `CONTENTS_DELIMITER`
	)

Splits a string according to the delimiter.

Parameters

s	String to split
delimiter	Delimiter

Returns: std::vector<std::string> Vector of strings

Definition at line 338 of file Utils.cpp.

◆ transformVector3f()

core::Vector3f bioexplorer::common::transformVector3f	(	const Vector3f &	v,
		const Matrix4f &	transformation
	)

Definition at line 456 of file Utils.cpp.

◆ trim()

std::string & bioexplorer::common::trim ( std::string & s )

Left and right trim of a string.

Parameters

s	String to trim

Returns: Trimmed string

Definition at line 78 of file Utils.cpp.

◆ valueFromDoubles()

double bioexplorer::common::valueFromDoubles	(	const doubles &	array,
		const size_t	index,
		const double	defaultValue
	)

Returns the value of an array of double at a given index. Default value if index is out of bounds.

Parameters

array	Array of doubles
index	Index in the array
defaultValue	Default value if index is out of bounds

Returns: double

Definition at line 610 of file Utils.cpp.

◆ vector3dToDoubles()

doubles bioexplorer::common::vector3dToDoubles ( const core::Vector3d & value )

Converts a 3D vector to a vector of doubles.

Parameters

value A 3D vector

Returns: Vector3d Vector of doubles

Definition at line 267 of file Utils.cpp.

◆ weightedRandomRotation()

core::Quaterniond bioexplorer::common::weightedRandomRotation	(	const core::Quaterniond &	q,
		const uint64_t	seed,
		const uint64_t	index,
		const double	weight
	)

Randomly alters a quaternion according to the specified parameters.

Parameters

q	Initial quaternion
seed	Random seed
index	Index of the quaternion (typically the index of the corresponding element instance)
weight	Weight of the alteration

Returns: Quaterniond Resulting modified quaternion

Definition at line 573 of file Utils.cpp.

◆ worleyNoise()

double bioexplorer::common::worleyNoise	(	const Vector3d &	p,
		double	cellCount
	)

Definition at line 541 of file Utils.cpp.

Variable Documentation

◆ _faceIndex

uint64_t bioexplorer::common::_faceIndex = 0

Definition at line 37 of file MeshShape.cpp.

◆ _instanceCoveringProcess

double bioexplorer::common::_instanceCoveringProcess = 0.0

Definition at line 39 of file MeshShape.cpp.

◆ _surfaceCoveringProcess

double bioexplorer::common::_surfaceCoveringProcess = 0.0

Definition at line 38 of file MeshShape.cpp.

◆ equalityEpsilon

const float bioexplorer::common::equalityEpsilon = 1e-6f

Definition at line 41 of file ThreadSafeContainer.cpp.

◆ randoms

const std::vector<double> bioexplorer::common::randoms

Initial value:

= {
28148369141,    0.796861024715,  0.074193743197,  0.482440306945,  0.992773878589,  0.709310247315,
988484235866,   0.714714091734,  0.643116781373,  0.718637647581,  0.926101047171,  0.846328419497,
00297438943897, 0.137931361741,  0.17772706582,   0.444643858689,  0.629288179636,  0.613382480923,
630336849193,   0.311776793613,  0.08508451954,   0.30789230424,   0.0498092039943, 0.773779960365,
768769637233,   0.882161981223,  0.976723516158,  0.449556805562,  0.817669534955,  0.616539655821,
758216742242,   0.858237417116,  0.979179183398,  0.65720513278,   0.386168029804,  0.0998493897615,
962177647248,   0.108548816296,  0.996156105474,  0.941749314739,  0.406174983692,  0.158989971035,
654907085688,   0.538001003242,  0.332477591342,  0.978302973988,  0.98409103864,   0.241245008961,
68183193795,    0.653235229058,  0.0606653606997, 0.0566309454523, 0.919881491327,  0.905670025614,
637338702024,   0.121894161196,  0.937476480417,  0.017741798193,  0.61697799368,   0.709261525057,
859211525517,   0.96409034113,   0.0972400297964, 0.181073145261,  0.284798532204,  0.413248667128,
332659388212,   0.340977212815,  0.820090638467,  0.560592082547,  0.183689859617,  0.2575201395,
289725466835,   0.522736633275,  0.882031679296,  0.654563598748,  0.531309473163,  0.134963142807,
601297763714,   0.483506281956,  0.283419807601,  0.454826306306,  0.508528602139,  0.897831546117,
900287116387,   0.688215721818,  0.615842816633,  0.78273583615,   0.927051829764,  0.425934500525,
741948788292,   0.0813684454157, 0.998899378243,  0.551326196783,  0.0682702415237, 0.389893584905,
15548746549,    0.468047910542,  0.948034950244,  0.202074251433,  0.347536181502,  0.024377007386,
2214820153,     0.846643514875,  0.391710310296,  0.692284401129,  0.244449478476,  0.0181219259474,
336741055884,   0.70325501105,   0.968370058703,  0.892508506776,  0.538387343968,  0.843838154621,
0790397063184,  0.103191163974,  0.243711484807,  0.694622402023,  0.798540922368,  0.21746310996,
870761691473,   0.368350833275,  0.228505271004,  0.3741636072,    0.347291149036,  0.753449262487,
890757112194,   0.167150644248}

Definition at line 42 of file Utils.cpp.

Classes

Typedefs

Enumerations

Functions

Variables

Typedef Documentation

◆ AssemblyConstraint

◆ AssemblyConstraints

◆ AssemblyMap

◆ AssemblyPtr

◆ Bifurcations

◆ GeometryEdges

◆ GeometryNodes

◆ MaterialSet

◆ Neighbours

◆ NodeMap

◆ NodePtr

◆ RNAShapePtr

◆ SDFGeometriesPtr

◆ ShapePtr

◆ ThreadSafeContainers

Enumeration Type Documentation

◆ AssemblyConstraintType

◆ ReportType

◆ XYZFileFormat

Function Documentation

◆ andCheck()

◆ boolAsString()

◆ capsuleVolume()

◆ cells()

◆ combineTransformations()

◆ coneVolume()

◆ cylinderVolume()

◆ doublesToCellAnimationDetails()

◆ doublesToMolecularSystemAnimationDetails()

◆ doublesToNeuronsReportParametersDetails()

◆ doublesToQuaterniond()

◆ doublesToVector2d()

◆ doublesToVector3d()

◆ doublesToVector4d()

◆ doublesToVector4ds()

◆ frac() [1/2]

◆ frac() [2/2]

◆ getAlignmentToGrid()

◆ getClippingPlanes()

◆ getMaterialIdFromOrientation()

◆ getPointsInSphere()

◆ hash()

◆ isClipped()

◆ ltrim()

◆ mix()

◆ mod()

◆ noise()

◆ randomQuaternion()

◆ rayBoxIntersection()

◆ rnd0()

◆ rnd1()

◆ rnd2()

◆ rnd3()

◆ rtrim()

◆ setDefaultTransferFunction()

◆ sphereFilling()

◆ sphereVolume()

◆ split()

◆ transformVector3f()

◆ trim()

◆ valueFromDoubles()

◆ vector3dToDoubles()

◆ weightedRandomRotation()

◆ worleyNoise()

Variable Documentation

◆ _faceIndex

◆ _instanceCoveringProcess

◆ _surfaceCoveringProcess

◆ equalityEpsilon

◆ randoms